STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxCPutative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189. (232 aa)    
Predicted Functional Partners:
msrAB
Bifunctional (RS)-methionine sulfoxide reductase A/B; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.995
ahpC
Alkyl hydroperoxide reductase protein, peroxidase component; Pfam matches to PF00578.17 AhpC-TSA, and to PF10417.5 1-cysPrx_C; draft locus tag CAMGR0001_0503.
  
 0.834
AKT93559.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam matches to PF07992.10 Pyr_redox_2, and to PF02852.18 Pyr_redox_dim; draft locus tag CAMGR0001_0247.
   
 0.830
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
    0.801
petC
Ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit; Pfam match to PF00034.17 Cytochrom_C; draft locus tag CAMGR0001_1836.
  
   0.796
clpA
ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family.
   
 
 0.789
AKT92573.1
Putative protein (DUF3971 domain); Pfam matches to PF13109.2 AsmA_1, and to PF13116.2 DUF3971; draft locus tag CAMGR0001_0945.
  
 
   0.786
dsbD
Thiol:disulfide interchange protein DsbD; Pfam matches to PF11412.4 DsbC, and to PF02683.11 DsbD, and to PF00085.16 Thioredoxin; draft locus tag CAMGR0001_2367.
  
 
 0.772
mreC
Rod shape-determining protein MreC; Pfam match to PF04085.10 MreC; draft locus tag CAMGR0001_2715.
  
     0.763
AKT91894.1
Putative lipooligosaccharide transport system, permease component (LptG family); Pfam match to PF03739.10 YjgP_YjgQ; draft locus tag CAMGR0001_2542.
  
     0.763
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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