Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aat | clpA | CGRAC_0959 | CGRAC_0958 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | 0.831 |
| aat | clpS | CGRAC_0959 | CGRAC_0957 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.944 |
| aat | ftsI | CGRAC_0959 | CGRAC_0960 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185. | 0.638 |
| aat | smpB | CGRAC_0959 | CGRAC_0955 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.607 |
| aat | trxC | CGRAC_0959 | CGRAC_0956 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189. | 0.760 |
| cbpA | clpA | CGRAC_1276 | CGRAC_0958 | Co-chaperone-curved DNA binding protein A; Pfam matches to PF00226.27 DnaJ, and to PF01556.14 DnaJ_C; draft locus tag CAMGR0001_0712. | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | 0.624 |
| cbpA | dnaK | CGRAC_1276 | CGRAC_1351 | Co-chaperone-curved DNA binding protein A; Pfam matches to PF00226.27 DnaJ, and to PF01556.14 DnaJ_C; draft locus tag CAMGR0001_0712. | DnaK system heat shock chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.993 |
| cbpA | grpE | CGRAC_1276 | CGRAC_1350 | Co-chaperone-curved DNA binding protein A; Pfam matches to PF00226.27 DnaJ, and to PF01556.14 DnaJ_C; draft locus tag CAMGR0001_0712. | DnaK system nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Se [...] | 0.887 |
| cbpA | htpG | CGRAC_1276 | CGRAC_1222 | Co-chaperone-curved DNA binding protein A; Pfam matches to PF00226.27 DnaJ, and to PF01556.14 DnaJ_C; draft locus tag CAMGR0001_0712. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.877 |
| clpA | aat | CGRAC_0958 | CGRAC_0959 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.831 |
| clpA | cbpA | CGRAC_0958 | CGRAC_1276 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Co-chaperone-curved DNA binding protein A; Pfam matches to PF00226.27 DnaJ, and to PF01556.14 DnaJ_C; draft locus tag CAMGR0001_0712. | 0.624 |
| clpA | clpP | CGRAC_0958 | CGRAC_0080 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.916 |
| clpA | clpS | CGRAC_0958 | CGRAC_0957 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.959 |
| clpA | dnaK | CGRAC_0958 | CGRAC_1351 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | DnaK system heat shock chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.970 |
| clpA | ftsI | CGRAC_0958 | CGRAC_0960 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185. | 0.633 |
| clpA | grpE | CGRAC_0958 | CGRAC_1350 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | DnaK system nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Se [...] | 0.802 |
| clpA | htpG | CGRAC_0958 | CGRAC_1222 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.628 |
| clpA | smpB | CGRAC_0958 | CGRAC_0955 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.624 |
| clpA | trxC | CGRAC_0958 | CGRAC_0956 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189. | 0.789 |
| clpP | clpA | CGRAC_0080 | CGRAC_0958 | ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | 0.916 |
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