Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aat | clpA | CGRAC_0959 | CGRAC_0958 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | 0.831 |
| aat | clpS | CGRAC_0959 | CGRAC_0957 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.944 |
| aat | ftsI | CGRAC_0959 | CGRAC_0960 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185. | 0.638 |
| aat | ispE | CGRAC_0959 | CGRAC_0954 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 4-diphosphocytidyl-2-C-methylerythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.425 |
| aat | pheA | CGRAC_0959 | CGRAC_0432 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Chorismate mutase / prephenate dehydratase; Bifunctional; Pfam matches to PF00800.14 PDT, and to PF01817.17 CM_2, and to PF01842.21 ACT; draft locus tag CAMGR0001_2539. | 0.424 |
| aat | smpB | CGRAC_0959 | CGRAC_0955 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.607 |
| aat | trxC | CGRAC_0959 | CGRAC_0956 | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189. | 0.760 |
| clpA | aat | CGRAC_0958 | CGRAC_0959 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.831 |
| clpA | clpS | CGRAC_0958 | CGRAC_0957 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.959 |
| clpA | ftsI | CGRAC_0958 | CGRAC_0960 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185. | 0.633 |
| clpA | ispE | CGRAC_0958 | CGRAC_0954 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | 4-diphosphocytidyl-2-C-methylerythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.484 |
| clpA | smpB | CGRAC_0958 | CGRAC_0955 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.624 |
| clpA | trxC | CGRAC_0958 | CGRAC_0956 | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189. | 0.789 |
| clpS | aat | CGRAC_0957 | CGRAC_0959 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.944 |
| clpS | clpA | CGRAC_0957 | CGRAC_0958 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | ATP-dependent Clp protease, ATP-binding subunit; Pfam matches to PF07724.10 AAA_2, and to PF10431.5 ClpB_D2-small, and to PF00004.25 AAA; draft locus tag CAMGR0001_1187; Belongs to the ClpA/ClpB family. | 0.959 |
| clpS | ftsI | CGRAC_0957 | CGRAC_0960 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185. | 0.599 |
| clpS | ispE | CGRAC_0957 | CGRAC_0954 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 4-diphosphocytidyl-2-C-methylerythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.470 |
| clpS | smpB | CGRAC_0957 | CGRAC_0955 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.648 |
| clpS | trxC | CGRAC_0957 | CGRAC_0956 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189. | 0.801 |
| ftsI | aat | CGRAC_0960 | CGRAC_0959 | Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185. | Leucyl, phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.638 |
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