STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92411.1Polysaccharide biosynthesis protein, nucleotide sugar dehydrogenase, TviB family; Pfam matches to PF03721.10 UDPG_MGDP_dh_N, and to PF00984.15 UDPG_MGDP_dh, and to PF03720.11 UDPG_MGDP_dh_C; draft locus tag CAMGR0001_1183; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (418 aa)    
Predicted Functional Partners:
AKT92184.1
UDP-N-acetylglucosamine-2-epimerase; Pfam match to PF02350.15 Epimerase_2; draft locus tag CAMGR0001_1514; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.977
pglF
UDP-N-acetylglucosamine C-6 dehydratase; Pfam match to PF02719.11 Polysacc_synt_2; draft locus tag CAMGR0001_2008.
  
 
 0.916
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
  
 
 0.911
murA
UDP-N-acetylglucosamine enolpyruvoyl transferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
  0.900
lpxA
UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
    
 0.804
AKT92200.1
Bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Pfam matches to PF01050.14 MannoseP_isomer, and to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1498; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.436
AKT92412.1
Ankyrin domain protein; Pfam match to PF12796.3 Ank_2; draft locus tag CAMGR0001_1182.
       0.427
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.