STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92412.1Ankyrin domain protein; Pfam match to PF12796.3 Ank_2; draft locus tag CAMGR0001_1182. (392 aa)    
Predicted Functional Partners:
AKT92098.1
Metallophosphatase; Pfam match to PF00149.24 Metallophos; draft locus tag CAMGR0001_1631.
  
 
 0.760
AKT92677.1
Hypothetical protein; Draft locus tag CAMGR0001_0781.
   
 0.682
AKT92269.1
Ankyrin domain protein; Pfam match to PF13637.2 Ank_4; draft locus tag CAMGR0001_1400.
  
     0.531
napL
Nitrate reductase accessory protein; Draft locus tag CAMGR0001_2428.
    
 0.509
petB
Ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
   0.481
trxC
Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189.
  
 
 0.445
AKT91805.1
rRNA methyltransferase, TrmH family, group 3; Pfam matches to PF00588.15 SpoU_methylase, and to PF08032.8 SpoU_sub_bind; draft locus tag CAMGR0001_2659; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
 
  0.434
AKT92411.1
Polysaccharide biosynthesis protein, nucleotide sugar dehydrogenase, TviB family; Pfam matches to PF03721.10 UDPG_MGDP_dh_N, and to PF00984.15 UDPG_MGDP_dh, and to PF03720.11 UDPG_MGDP_dh_C; draft locus tag CAMGR0001_1183; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.427
rpsP
Pfam match to PF00886.15 Ribosomal_S16; draft locus tag CAMGR0001_2863; Belongs to the bacterial ribosomal protein bS16 family.
  
   0.413
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.