STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpAPenicillin-binding protein 1A; Bifunctional; Pfam matches to PF00912.18 Transgly, and to PF00905.18 Transpeptidase; draft locus tag CAMGR0001_1175. (636 aa)    
Predicted Functional Partners:
pbpB
Penicillin-binding protein 1C; Pfam matches to PF00912.18 Transgly, and to PF00905.18 Transpeptidase; draft locus tag CAMGR0001_0866.
  
  
 
0.929
AKT93267.1
Hypothetical protein; Draft locus tag CAMGR0001_0493.
    
 
 0.820
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.800
AKT92416.1
Putative membrane protein; Draft locus tag CAMGR0001_1178.
       0.800
maf
Septum formation protein Maf; Pfam match to PF02545.10 Maf; draft locus tags CAMGR0001_1176 and CAMGR0001_1177.
       0.800
ftsW
Cell division protein, FtsW/RodA/SpoVE family; Pfam match to PF01098.15 FTSW_RODA_SPOVE; draft locus tag CAMGR0001_0794; Belongs to the SEDS family.
  
 
 
 0.782
ftsI
Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185.
 
 
 
0.736
mltG
YceG-like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
   
 0.702
murG
N-acetylglucosaminyl transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
  
 0.679
AKT92315.1
Zinc metallopeptidase, M23 family; Pfam match to PF01551.18 Peptidase_M23; draft locus tag CAMGR0001_1315.
  
     0.667
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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