STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92442.1Bacterial OB fold (BOF) protein; Pfam match to PF04076.9 BOF; draft locus tag CAMGR0001_1140. (118 aa)    
Predicted Functional Partners:
AKT92619.1
Putative peptidase propeptide; Pfam matches to PF03413.15 PepSY, and to PF03413.15 PepSY; draft locus tag CAMGR0001_0876.
  
    0.860
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.787
AKT92384.1
YbaK-like protein YeaK; Pfam match to PF04073.11 tRNA_edit; draft locus tag CAMGR0001_1221.
  
     0.732
AKT92582.1
Hypothetical protein; Draft locus tag CAMGR0001_0935.
  
     0.649
dcuB
Anaerobic C4-dicarboxylate transporter; Pfam matches to PF03605.10 DcuA_DcuB, and to PF03605.10 DcuA_DcuB; draft locus tag CAMGR0001_2185.
  
     0.599
dsbA1
Protein disulfide oxidoreductase; Pfam match to PF13462.2 Thioredoxin_4; draft locus tag CAMGR0001_2301.
  
     0.595
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
     0.558
AKT92507.1
Anaerobic C4-dicarboxylate transporter, DcuA/DcuB family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
     0.548
dcuC
Putative C4-dicarboxylate transporter, DcuC family; Pfam match to PF03606.11 DcuC; draft locus tag CAMGR0001_2271.
  
     0.536
astA1
Arylsulfate sulfotransferase; Pfam match to PF05935.7 Arylsulfotrans; draft locus tag CAMGR0001_2300.
  
     0.524
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.