STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92453.1TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1128. (770 aa)    
Predicted Functional Partners:
AKT93569.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0259.
 
  
 0.770
AKT92133.1
Putative TonB-dependent ferric coprogen/ferric rhodotorulic acid receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1580.
 
  
 0.717
AKT93552.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0236.
 
  
 0.607
AKT92879.1
TonB-dependent siderophore receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1962.
 
  
 0.605
chuA
Heme uptake system outer membrane receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0201.
  
   
 0.541
AKT93014.1
Putative CorA-like Mg2+ transporter protein; Pfam match to PF01544.14 CorA; draft locus tag CAMGR0001_1759.
  
     0.537
AKT92711.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0730.
  
   
 0.526
AKT93068.1
Ferrirhodotorulic acid ABC transporter, inner membrane protein; Pfam match to PF03239.10 FTR1; draft locus tag CAMGR0001_1834.
   
  
 0.524
AKT92452.1
Virulence factor, BrkB family protein; Pfam match to PF03631.11 Virul_fac_BrkB; draft locus tag CAMGR0001_1129.
       0.516
AKT92148.1
Putative iron-regulated membrane protein; Pfam match to PF03929.12 PepSY_TM; draft locus tag CAMGR0001_1553.
 
  
 0.507
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.