STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92456.1Mechanosensitive ion channel family protein; Pfam match to PF00924.14 MS_channel; draft locus tag CAMGR0001_1125. (569 aa)    
Predicted Functional Partners:
AKT92454.1
Putative protein (putative TrkA domain); Pfam match to PF02080.17 TrkA_C; draft locus tag CAMGR0001_1127.
 
     0.900
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.800
yqeV
MiaB-like tRNA modifying enzyme; Pfam matches to PF00919.16 UPF0004, and to PF04055.17 Radical_SAM; draft locus tag CAMGR0001_1124.
       0.800
ftsH1
Integral membrane ATP-dependent zinc metallopeptidase; Pfam matches to PF00004.25 AAA, and to PF01434.14 Peptidase_M41; draft locus tags CAMGR0001_1122 and CAMGR0001_1123; Belongs to the AAA ATPase family.
       0.800
hemD
Uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
     0.770
ftsX
Cell division protein FtsX; Draft locus tag CAMGR0001_1547.
 
     0.757
lptA
Putative lipooligosaccharide transport system, periplasmic component (LptA family); Pfam match to PF03968.10 OstA; draft locus tag CAMGR0001_2360.
  
     0.757
AKT91894.1
Putative lipooligosaccharide transport system, permease component (LptG family); Pfam match to PF03739.10 YjgP_YjgQ; draft locus tag CAMGR0001_2542.
  
     0.740
moaE
Molybdopterin synthase, large subunit; Pfam match to PF02391.13 MoaE; draft locus tag CAMGR0001_1856.
  
     0.733
AKT92475.1
Putative type II secretion system protein; Draft locus tag CAMGR0001_1103.
  
     0.727
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.