STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92502.1Putative lipoprotein (DUF799 domain); Pfam match to PF05643.7 DUF799; draft locus tag CAMGR0001_1063. (226 aa)    
Predicted Functional Partners:
AKT92501.1
Putative lipoprotein; Pfam match to PF16068.1 DUF4810; draft locus tag CAMGR0001_1064.
 
    0.979
AKT92500.1
Putative lipoprotein, CsgG family; Pfam match to PF03783.10 CsgG; draft locus tag CAMGR0001_1065.
 
    0.971
AKT92503.1
Hypothetical protein; Draft locus tag CAMGR0001_1062.
       0.724
AKT93478.1
Flavin reductase (DIM6/NTAB) family protein; Draft locus tag CAMGR0001_0129.
  
     0.476
AKT91924.1
Hemolysin secretion/activation protein, ShlB/FhaC/HecB family; Pfam matches to PF03865.9 ShlB, and to PF08479.7 POTRA_2; draft locus tag CAMGR0001_2500.
  
     0.474
AKT91925.1
Hemagglutinin domain-containing protein; Pfam matches to PF13332.2 Fil_haemagg_2, and to PF05860.9 Haemagg_act, and to PF13332.2 Fil_haemagg_2, and to PF13332.2 Fil_haemagg_2, and to PF13332.2 Fil_haemagg_2; draft locus tags CAMGR0001_0362, CAMGR0001_2498 and CAMGR0001_2499.
  
     0.471
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.