STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspAAspartate ammonia-lyase; Pfam matches to PF00206.16 Lyase_1, and to PF10415.5 FumaraseC_C; draft locus tag CAMGR0001_1050. (468 aa)    
Predicted Functional Partners:
ansB
Asparaginase II; Bifunctional; Pfam match to PF00710.16 Asparaginase; draft locus tag CAMGR0001_0068.
  
 
 0.943
AKT93386.1
L-asparaginase, type II; Pfam match to PF00710.16 Asparaginase; draft locus tag CAMGR0001_2176.
  
 
 0.943
AKT93281.1
Aspartate racemase; Pfam match to PF01177.18 Asp_Glu_race; draft locus tag CAMGR0001_0473; Belongs to the aspartate/glutamate racemases family.
   
  0.942
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
 
 0.908
aspB
Aspartate aminotransferase, aminotransferase, classes I and II; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_0815.
    
 0.907
argH
Pfam matches to PF00206.16 Lyase_1, and to PF14698.2 ASL_C2; draft locus tag CAMGR0001_0085.
     
 0.906
AKT93382.1
Aspartate racemase; Pfam match to PF01177.18 Asp_Glu_race; draft locus tag CAMGR0001_2170.
    
  0.903
purB
Pfam matches to PF00206.16 Lyase_1, and to PF10397.5 ADSL_C; draft locus tag CAMGR0001_0342; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.902
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.902
AKT91868.1
Asparaginase family protein; Pfam match to PF01112.14 Asparaginase_2; draft locus tag CAMGR0001_2576.
     
 0.902
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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