STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNDL-methionine ABC transporter MetINQ, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (329 aa)    
Predicted Functional Partners:
metI
DL-methionine ABC transporter MetINQ, permease protein; Pfam match to PF00528.18 BPD_transp_1; draft locus tags CAMGR0001_0003 and CAMGR0001_1096.
 
 0.998
AKT92723.1
ABC transporter, permease protein; Pfam match to PF00528.18 BPD_transp_1; draft locus tag CAMGR0001_0003.
 
 0.998
metQ1
DL-methionine ABC transporter MetINQ, substrate-binding protein; Pfam match to PF03180.10 Lipoprotein_9; draft locus tag CAMGR0001_1046.
 
 0.993
metQ2
DL-methionine ABC transporter MetINQ, substrate-binding protein; Pfam match to PF03180.10 Lipoprotein_9; draft locus tag CAMGR0001_1031.
 
 0.992
ddh
Meso-diaminopimelate D-dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
       0.655
AKT93252.1
Methylenetetrahydrofolate reductase family protein; Pfam match to PF02219.13 MTHFR; draft locus tag CAMGR0001_0512; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.582
hyfI
Hydrogenase-4, component I; Pfam match to PF01058.18 Oxidored_q6; draft locus tag CAMGR0001_1284.
    
   0.552
metK
Methionine adenosyltransferase; Pfam matches to PF02773.12 S-AdoMet_synt_C, and to PF00438.16 S-AdoMet_synt_N, and to PF02772.12 S-AdoMet_synt_M; draft locus tag CAMGR0001_1200; Belongs to the AdoMet synthase family.
  
  
 0.536
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
      0.435
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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