STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92529.1Flavodoxin-like fold domain protein, putative NAD(P)H (quinone) dehydrogenase/reductase; Pfam match to PF02525.13 Flavodoxin_2; draft locus tag CAMGR0001_1020. (192 aa)    
Predicted Functional Partners:
aspB
Aspartate aminotransferase, aminotransferase, classes I and II; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_0815.
   
    0.637
AKT92528.1
Pfam match to PF03575.13 Peptidase_S51; draft locus tag CAMGR0001_1021.
       0.486
AKT92582.1
Hypothetical protein; Draft locus tag CAMGR0001_0935.
  
     0.458
AKT92384.1
YbaK-like protein YeaK; Pfam match to PF04073.11 tRNA_edit; draft locus tag CAMGR0001_1221.
  
     0.449
AKT91807.1
Aspartate aminotransferase; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_2655.
   
    0.416
eptC
Phosphoethanolamine transferase; Pfam matches to PF08019.8 DUF1705, and to PF00884.19 Sulfatase; draft locus tags CAMGR0001_0878 and CAMGR0001_0879.
  
     0.414
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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