STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysKCysteine synthase; Pfam match to PF00291.21 PALP; draft locus tag CAMGR0001_0998; Belongs to the cysteine synthase/cystathionine beta- synthase family. (304 aa)    
Predicted Functional Partners:
cysE
Serine O-acetyltransferase; Pfam match to PF00132.20 Hexapep; draft locus tag CAMGR0001_0817.
 
 0.995
metC
Cystathionine-beta-lyase; Pfam match to PF01053.16 Cys_Met_Meta_PP; draft locus tag CAMGR0001_0528.
  
 0.986
metY
O-acetylhomoserine sulfhydrylase; Pfam match to PF01053.16 Cys_Met_Meta_PP; draft locus tag CAMGR0001_1000.
  
 
 0.966
serC
Phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.924
aspB
Aspartate aminotransferase, aminotransferase, classes I and II; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_0815.
   
 0.913
patB
Putative PLP-dependent C-S lyase; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_0326.
    
 0.911
AKT92016.1
Putative thiosulfate/polysulfide reductase, molybdenum-binding subunit; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding, and to PF04879.12 Molybdop_Fe4S4; draft locus tag CAMGR0001_1712; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.902
cysS
cysteinyl-tRNA synthetase; Pfam matches to PF01406.15 tRNA-synt_1e, and to PF09190.7 DALR_2; draft locus tag CAMGR0001_0841; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.891
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
  
 
 0.877
metE
Cobalamin-independent homocysteine transmethylase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
 
 0.846
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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