STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92569.1Putative membrane protein (rhomboid family); Pfam match to PF01694.18 Rhomboid; draft locus tag CAMGR0001_0954. (185 aa)    
Predicted Functional Partners:
tatA
Twin arginine translocation system, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.722
amiA
Pfam matches to PF01520.14 Amidase_3, and to PF11741.4 AMIN; draft locus tag CAMGR0001_1537.
  
   0.695
sixA
Phosphohistidine phosphatase; Pfam match to PF00300.18 His_Phos_1; draft locus tag CAMGR0001_0953.
       0.672
AKT92648.1
Paraslipin family protein, SPFH superfamily; Pfam match to PF01145.21 Band_7; draft locus tag CAMGR0001_0830.
   
 0.601
AKT91618.1
Prohibitin family protein, SPFH superfamily; Pfam match to PF01145.21 Band_7; draft locus tag CAMGR0001_0018.
   
 0.598
AKT92496.1
Putative flotillin family protein, SPFH superfamily; Pfam match to PF01145.21 Band_7; draft locus tag CAMGR0001_1074.
   
 0.598
tatB
Twin arginine translocation system, TatB family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
   
 
 0.585
AKT92948.1
5,10-methenyltetrahydrofolate synthetase; Pfam match to PF01812.16 5-FTHF_cyc-lig; draft locus tag CAMGR0001_2038; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.585
ftsH1
Integral membrane ATP-dependent zinc metallopeptidase; Pfam matches to PF00004.25 AAA, and to PF01434.14 Peptidase_M41; draft locus tags CAMGR0001_1122 and CAMGR0001_1123; Belongs to the AAA ATPase family.
     
 0.429
ftsH2
Integral membrane ATP-dependent zinc metallopeptidase; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.429
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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