STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92587.1ABC transporter, permease protein; Pfam match to PF12698.3 ABC2_membrane_3; draft locus tag CAMGR0001_0923. (542 aa)    
Predicted Functional Partners:
AKT92585.1
ABC transporter, ATP-binding protein; Pfam matches to PF00005.23 ABC_tran, and to PF00005.23 ABC_tran; draft locus tag CAMGR0001_0925.
  
 0.972
AKT92589.1
ABC transporter, permease protein; Pfam match to PF12698.3 ABC2_membrane_3; draft locus tag CAMGR0001_0921.
 
  
 
0.906
AKT92584.1
RND family efflux transporter, membrane fusion subunit; Pfam matches to PF13533.2 Biotin_lipoyl_2, and to PF13437.2 HlyD_3; draft locus tag CAMGR0001_0932.
 
  
 0.820
AKT92586.1
Hypothetical protein; Draft locus tag CAMGR0001_0924.
       0.773
AKT92588.1
Hypothetical protein; Draft locus tag CAMGR0001_0922.
       0.773
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
   
 0.556
AKT92865.1
TolC-like outer membrane efflux protein; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_1947.
 
   
 0.489
AKT93488.1
Type I secretion system, outer membrane protein, TolC family; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_0141.
 
   
 0.473
nosF
Copper ABC transporter NosDFY, putative ATP-binding protein NosF; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2194.
  
  
 0.471
AKT91565.1
Nitroreductase; Pfam match to PF00881.20 Nitroreductase; draft locus tag CAMGR0001_0086.
   
    0.450
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.