STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92639.1Putative lipid asymmetry ABC transporter MlaABCDEF component MlaB; Draft locus tag CAMGR0001_0846. (187 aa)    
Predicted Functional Partners:
AKT92640.1
Lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD; Pfam match to PF02470.16 MlaD; draft locus tag CAMGR0001_0845.
  
   0.828
ruvA
RuvABC resolvasome, subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.800
ddlA
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.740
AKT92636.1
Putative toxin-antitoxin system, antitoxin component, Phd/YefM family; Pfam match to PF02604.15 PhdYeFM_antitox; draft locus tag CAMGR0001_0849.
   
   0.625
AKT92635.1
Alpha/beta hydrolase family protein; Pfam match to PF12697.3 Abhydrolase_6; draft locus tag CAMGR0001_0850.
       0.585
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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