STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92641.1Lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_0844. (256 aa)    
Predicted Functional Partners:
AKT92642.1
Lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE; Pfam match to PF02405.12 MlaE; draft locus tag CAMGR0001_0843.
 
 0.999
AKT92640.1
Lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD; Pfam match to PF02470.16 MlaD; draft locus tag CAMGR0001_0845.
 
 0.992
ttg2D
Lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC; Pfam match to PF05494.8 MlaC; draft locus tag CAMGR0001_2645.
  
 
 0.876
AKT92378.1
Putative membrane protein; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1228.
  
 
 0.872
cysS
cysteinyl-tRNA synthetase; Pfam matches to PF01406.15 tRNA-synt_1e, and to PF09190.7 DALR_2; draft locus tag CAMGR0001_0841; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.704
AKT92589.1
ABC transporter, permease protein; Pfam match to PF12698.3 ABC2_membrane_3; draft locus tag CAMGR0001_0921.
      0.643
murJ
Lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.604
nuoA
NADH:quinone oxidoreductase I, membrane subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.465
dnaX
DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
     0.407
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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