STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92648.1Paraslipin family protein, SPFH superfamily; Pfam match to PF01145.21 Band_7; draft locus tag CAMGR0001_0830. (306 aa)    
Predicted Functional Partners:
AKT92649.1
Putative slipin-associated protein (NfeD domain); Pfam match to PF01957.14 NfeD; draft locus tag CAMGR0001_0829.
 
  
 0.850
mqnC
Dehypoxanthinylfutalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
  
    0.780
AKT92650.1
Nucleotidyl transferase domain protein; Pfam match to PF01909.19 NTP_transf_2; draft locus tag CAMGR0001_0828.
       0.773
AKT92651.1
Hypothetical protein; Draft locus tag CAMGR0001_0827.
       0.773
ftsH1
Integral membrane ATP-dependent zinc metallopeptidase; Pfam matches to PF00004.25 AAA, and to PF01434.14 Peptidase_M41; draft locus tags CAMGR0001_1122 and CAMGR0001_1123; Belongs to the AAA ATPase family.
   
 0.744
ftsH2
Integral membrane ATP-dependent zinc metallopeptidase; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.744
AKT92569.1
Putative membrane protein (rhomboid family); Pfam match to PF01694.18 Rhomboid; draft locus tag CAMGR0001_0954.
   
 0.601
AKT92647.1
H+ antiporter protein, major facilitator superfamily; Pfam match to PF07690.12 MFS_1; draft locus tag CAMGR0001_0832.
       0.545
nadD/rsfS
Fused nicotinate-mononucleotide adenylyltransferase / ribosomal silencing factor; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
    
 
 0.401
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.