STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92664.1Transcriptional regulator, LysR family; Pfam matches to PF00126.23 HTH_1, and to PF03466.16 LysR_substrate; draft locus tag CAMGR0001_0808; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
AKT92665.1
Pfam match to PF00890.20 FAD_binding_2; draft locus tag CAMGR0001_0807; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
    0.528
AKT93538.1
Putative PAS sensor-containing diguanylate phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00989.20 PAS; draft locus tag CAMGR0001_0214.
  
  
 0.499
AKT91875.1
Two-component system response regulator; Pfam matches to PF00072.20 Response_reg, and to PF00486.24 Trans_reg_C; draft locus tag CAMGR0001_2567.
  
 
 0.439
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.