STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92676.1Hypothetical protein; Draft locus tag CAMGR0001_0782. (179 aa)    
Predicted Functional Partners:
ctsF
Transformation system, type II secretion system membrane protein CtsF; Pfam matches to PF00482.19 T2SSF, and to PF00482.19 T2SSF; draft locus tag CAMGR0001_0784.
       0.800
ctsE
Transformation system, type II secretion system ATPase CtsE; Pfam matches to PF00437.16 T2SSE, and to PF05157.11 T2SSE_N; draft locus tag CAMGR0001_0783.
       0.800
AKT92677.1
Hypothetical protein; Draft locus tag CAMGR0001_0781.
       0.800
AKT92678.1
ATPase, AAA family; Pfam match to PF13401.2 AAA_22; draft locus tag CAMGR0001_0780.
       0.800
ctsD
Transformation system, type II secretion system secretin protein CtsD; Pfam matches to PF00263.17 Secretin, and to PF07655.9 Secretin_N_2; draft locus tag CAMGR0001_0779.
       0.800
AKT92680.1
Hypothetical protein; Draft locus tag CAMGR0001_0778.
       0.800
AKT92681.1
Hypothetical protein; Draft locus tag CAMGR0001_0777.
       0.800
AKT92682.1
Hypothetical protein; Draft locus tag CAMGR0001_0776.
       0.800
era
GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.638
ftsK
DNA segregation ATPase FtsK/SpoIIIE; Pfam matches to PF01580.14 FtsK_SpoIIIE, and to PF09397.6 Ftsk_gamma, and to PF01580.14 FtsK_SpoIIIE; draft locus tag CAMGR0001_0786; Belongs to the FtsK/SpoIIIE/SftA family.
       0.458
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.