STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsDTransformation system, type II secretion system secretin protein CtsD; Pfam matches to PF00263.17 Secretin, and to PF07655.9 Secretin_N_2; draft locus tag CAMGR0001_0779. (502 aa)    
Predicted Functional Partners:
AKT92829.1
Type II and III secretion system protein; Pfam match to PF00263.17 Secretin; draft locus tag CAMGR0001_2457; Belongs to the bacterial secretin family.
 
  
  0.968
ctsF
Transformation system, type II secretion system membrane protein CtsF; Pfam matches to PF00482.19 T2SSF, and to PF00482.19 T2SSF; draft locus tag CAMGR0001_0784.
 
  
 0.932
ctsE
Transformation system, type II secretion system ATPase CtsE; Pfam matches to PF00437.16 T2SSE, and to PF05157.11 T2SSE_N; draft locus tag CAMGR0001_0783.
 
  
 0.920
AKT92678.1
ATPase, AAA family; Pfam match to PF13401.2 AAA_22; draft locus tag CAMGR0001_0780.
 
     0.867
AKT92677.1
Hypothetical protein; Draft locus tag CAMGR0001_0781.
  
  
 0.825
AKT92682.1
Hypothetical protein; Draft locus tag CAMGR0001_0776.
  
  
 0.821
AKT92676.1
Hypothetical protein; Draft locus tag CAMGR0001_0782.
       0.800
AKT92680.1
Hypothetical protein; Draft locus tag CAMGR0001_0778.
       0.800
AKT92681.1
Hypothetical protein; Draft locus tag CAMGR0001_0777.
       0.800
era
GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.638
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.