STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92707.1Hypothetical protein; Draft locus tag CAMGR0001_0742. (58 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.737
pqqL
Zn-dependent peptidase, M16 family; Pfam matches to PF00675.16 Peptidase_M16, and to PF05193.17 Peptidase_M16_C; draft locus tag CAMGR0001_0746.
       0.737
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.737
AKT92705.1
Short-chain dehydrogenase/reductase; Pfam match to PF13561.2 adh_short_C2; draft locus tag CAMGR0001_0744.
       0.737
pgsA
Phosphatidylglycerophosphate synthase; Pfam match to PF01066.17 CDP-OH_P_transf; draft locus tag CAMGR0001_0743; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.737
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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