STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdAPenicillin-binding protein 2; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_2355. (606 aa)    
Predicted Functional Partners:
rodA
Rod shape-determining protein; Pfam match to PF01098.15 FTSW_RODA_SPOVE; draft locus tag CAMGR0001_1542; Belongs to the SEDS family.
 
 0.984
ftsI
Cell division protein FtsI / penicillin-binding protein; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_1185.
  
  
 0.941
mrdB
Cell wall shape-determining protein; Pfam match to PF06723.9 MreB_Mbl; draft locus tag CAMGR0001_2716.
 
 
 
 0.866
ftsW
Cell division protein, FtsW/RodA/SpoVE family; Pfam match to PF01098.15 FTSW_RODA_SPOVE; draft locus tag CAMGR0001_0794; Belongs to the SEDS family.
 
 
 0.847
AKT92755.1
Putative membrane protein; Draft locus tag CAMGR0001_2356.
       0.800
AKT92756.1
Acetyltransferase; Pfam match to PF00583.20 Acetyltransf_1; draft locus tag CAMGR0001_2357.
       0.800
mreC
Rod shape-determining protein MreC; Pfam match to PF04085.10 MreC; draft locus tag CAMGR0001_2715.
 
 
 0.778
pbpA
Penicillin-binding protein 1A; Bifunctional; Pfam matches to PF00912.18 Transgly, and to PF00905.18 Transpeptidase; draft locus tag CAMGR0001_1175.
 
 
 
 0.662
murE
UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
 0.647
engB
Ribosome biogenesis GTP-binding protein YsxC/EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.577
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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