STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tupATungsten ABC transporter TupABC, periplasmic tungstate-binding protein; Pfam match to PF12849.3 PBP_like_2; draft locus tag CAMGR0001_2413. (272 aa)    
Predicted Functional Partners:
tupB
Tungsten ABC transporter TupABC, permease protein; Pfam match to PF00528.18 BPD_transp_1; draft locus tag CAMGR0001_2414.
 
  
 0.984
tupC
Tungsten ABC transporter TupABC, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2415.
 
  
 0.955
fdhF
Formate dehydrogenase N, alpha subunit, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding; draft locus tags CAMGR0001_0419 and CAMGR0001_0420; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.630
AKT93319.1
Iron-sulfur cluster domain protein; Pfam match to PF12838.3 Fer4_7; draft locus tags CAMGR0001_0414 and CAMGR0001_0415.
  
     0.536
fdhC
Formate dehydrogenase N, cytochrome b-556 subunit; Pfam match to PF01292.16 Ni_hydr_CYTB; draft locus tag CAMGR0001_1853.
 
     0.472
fdhG
Formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
   
 0.449
AKT91816.1
Transcriptional regulator, ModE family; Pfam matches to PF03459.13 TOBE, and to PF03459.13 TOBE, and to PF00126.23 HTH_1; draft locus tag CAMGR0001_2643.
     
 0.427
AKT91818.1
Molybdenum-pterin binding domain-containing protein; Pfam match to PF03459.13 TOBE; draft locus tag CAMGR0001_2641.
     
 0.427
AKT92795.1
Hypothetical protein; Draft locus tag CAMGR0001_2411.
       0.400
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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