STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92859.1Jag domain protein; Pfam match to PF14804.2 Jag_N; draft locus tag CAMGR0001_1941. (251 aa)    
Predicted Functional Partners:
AKT93135.1
Putative RNA-binding protein (KH domain); Pfam match to PF13083.2 KH_4; draft locus tag CAMGR0001_2862.
   
 
 0.959
oxaA
Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
  
 0.953
rnpA
Ribonuclease P, protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
  
 0.904
AKT92861.1
Membrane protein insertion efficiency factor, YidD family; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.902
rpmH
50S ribosomal protein L34; Draft locus tag CAMGR0001_1945; Belongs to the bacterial ribosomal protein bL34 family.
     
 0.836
mnmE
5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
     
 0.809
AKT92874.1
Putative lipooligosaccharide transport system, permease component (LptF family); Pfam match to PF03739.10 YjgP_YjgQ; draft locus tag CAMGR0001_1957.
 
     0.780
ftsX
Cell division protein FtsX; Draft locus tag CAMGR0001_1547.
  
    0.776
AKT91824.1
Putative protein (DUF507 domain); Pfam match to PF04368.9 DUF507; draft locus tag CAMGR0001_2632.
  
     0.770
atpF-2
ATP synthase, F0 complex, b subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.765
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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