STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92864.1Hypothetical protein; Draft locus tag CAMGR0001_1946. (117 aa)    
Predicted Functional Partners:
AKT92865.1
TolC-like outer membrane efflux protein; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_1947.
       0.773
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
       0.752
macA
Macrolide-specific efflux protein, membrane fusion protein MacA; Pfam match to PF16576.1 HlyD_D23; draft locus tag CAMGR0001_1949; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.694
mnmE
5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.565
AKT92859.1
Jag domain protein; Pfam match to PF14804.2 Jag_N; draft locus tag CAMGR0001_1941.
       0.565
oxaA
Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
       0.565
AKT92861.1
Membrane protein insertion efficiency factor, YidD family; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.565
rnpA
Ribonuclease P, protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.565
rpmH
50S ribosomal protein L34; Draft locus tag CAMGR0001_1945; Belongs to the bacterial ribosomal protein bL34 family.
       0.565
yedA
Putative membrane protein, putative permease; Draft locus tag CAMGR0001_1950.
       0.530
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.