STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93003.1Acetyltransferase; Pfam match to PF13508.2 Acetyltransf_7; draft locus tag CAMGR0001_0690. (146 aa)    
Predicted Functional Partners:
AKT93002.1
Metal-dependent hydrolase/amidohydrolase; Pfam match to PF04909.10 Amidohydro_2; draft locus tag CAMGR0001_0689.
       0.480
AKT93001.1
Hypothetical protein; Draft locus tag CAMGR0001_0687.
       0.423
AKT93005.1
Putative protein (DUF45 domain); Pfam matches to PF01863.13 DUF45, and to PF01863.13 DUF45; draft locus tag CAMGR0001_0694.
  
    0.410
AKT93004.1
MatE efflux family protein; Pfam matches to PF01554.14 MatE, and to PF01554.14 MatE; draft locus tag CAMGR0001_0692.
       0.405
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.