STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93062.1Phosphomannomutase/phosphoglucomutase; Bifunctional; Pfam matches to PF02878.12 PGM_PMM_I, and to PF02879.12 PGM_PMM_II, and to PF02880.12 PGM_PMM_III, and to PF00408.16 PGM_PMM_IV; draft locus tag CAMGR0001_1842. (456 aa)    
Predicted Functional Partners:
galU
UTP--glucose-1-phosphate uridylyltransferase; Pfam match to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1722.
   
 0.975
AKT92200.1
Bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Pfam matches to PF01050.14 MannoseP_isomer, and to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1498; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 0.967
rfbF
Glucose-1-phosphate cytidylyltransferase; Pfam match to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_0392.
  
 
 0.935
pgi
Phosphoglucose isomerase; Pfam match to PF00342.15 PGI; draft locus tag CAMGR0001_1723.
  
 
 0.922
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.920
tkt
Transketolase; Pfam matches to PF00456.17 Transketolase_N, and to PF02779.20 Transket_pyr, and to PF02780.16 Transketolase_C; draft locus tag CAMGR0001_2754; Belongs to the transketolase family.
   
 0.916
fbaA
Fructose-bisphosphate aldolase, class IIA; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 
 0.843
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
    
 0.818
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.803
AKT93059.1
LemA family protein; Pfam match to PF04011.8 LemA; draft locus tag CAMGR0001_1845.
  
    0.775
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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