STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93063.1CreA family protein; Pfam match to PF05981.8 CreA; draft locus tag CAMGR0001_1841. (164 aa)    
Predicted Functional Partners:
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.551
AKT93062.1
Phosphomannomutase/phosphoglucomutase; Bifunctional; Pfam matches to PF02878.12 PGM_PMM_I, and to PF02879.12 PGM_PMM_II, and to PF02880.12 PGM_PMM_III, and to PF00408.16 PGM_PMM_IV; draft locus tag CAMGR0001_1842.
  
    0.551
AKT93059.1
LemA family protein; Pfam match to PF04011.8 LemA; draft locus tag CAMGR0001_1845.
       0.545
AKT93061.1
Hypothetical protein; Draft locus tag CAMGR0001_1843.
       0.545
AKT93057.1
Putative phosphatase (TPM domain); Pfam match to PF04536.10 TPM; draft locus tag CAMGR0001_1847.
       0.525
AKT93058.1
Putative phosphatase (TPM domain); Pfam match to PF04536.10 TPM; draft locus tag CAMGR0001_1846.
       0.525
ccsBA
Cytochrome c biogenesis protein; Pfam matches to PF01578.16 Cytochrom_C_asm, and to PF05140.10 ResB, and to PF05140.10 ResB; draft locus tag CAMGR0001_1840.
       0.404
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.