STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
p19Ferrirhodotorulic acid ABC transporter, periplasmic binding protein; Pfam match to PF10634.5 Iron_transport; draft locus tag CAMGR0001_1833. (173 aa)    
Predicted Functional Partners:
AKT93068.1
Ferrirhodotorulic acid ABC transporter, inner membrane protein; Pfam match to PF03239.10 FTR1; draft locus tag CAMGR0001_1834.
 
  
 0.990
AKT93070.1
Ferrirhodotorulic acid ABC transporter, permease protein; Pfam matches to PF10080.5 DUF2318, and to PF04945.9 YHS; draft locus tag CAMGR0001_1831.
 
  
 0.948
AKT93072.1
Ferrirhodotorulic acid ABC transporter, permease protein; Pfam matches to PF12704.3 MacB_PCD, and to PF02687.17 FtsX; draft locus tag CAMGR0001_1829.
 
    0.862
AKT93071.1
Ferrirhodotorulic acid ABC transporter, permease protein; Pfam matches to PF02687.17 FtsX, and to PF12704.3 MacB_PCD; draft locus tag CAMGR0001_1830.
 
    0.852
AKT93073.1
Ferrirhodotorulic acid ABC transporter, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_1828.
 
    0.740
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
    0.607
trxB
Thioredoxin reductase; Pfam match to PF07992.10 Pyr_redox_2; draft locus tag CAMGR0001_2651.
   
    0.535
AKT93380.1
Hypothetical protein; Draft locus tag CAMGR0001_2168.
   
    0.477
ftsE
Cell division ATP-binding protein FtsE; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_1546.
  
    0.450
AKT92292.1
ABC transporter, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_1351.
  
    0.450
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.