STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93096.1Hypothetical protein; Draft locus tag CAMGR0001_2805. (56 aa)    
Predicted Functional Partners:
AKT93097.1
Hypothetical protein; Draft locus tag CAMGR0001_2806.
       0.773
AKT93098.1
DpnD/PcfM-like protein; Pfam match to PF14207.2 DpnD-PcfM; draft locus tag CAMGR0001_2807.
       0.773
AKT93099.1
Type II restriction endonuclease, DpnII family; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family.
       0.773
AKT93100.1
DNA methyltransferase; Pfam match to PF01555.14 N6_N4_Mtase; draft locus tag CAMGR0001_2809; Belongs to the N(4)/N(6)-methyltransferase family.
       0.773
AKT93200.1
Putative Co/Zn/Cd cation transporter; Pfam match to PF01545.17 Cation_efflux; draft locus tag CAMGR0001_0573; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
     0.465
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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