STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garKGlycerate kinase; Pfam match to PF02595.11 Gly_kinase; draft locus tag CAMGR0001_2818; Belongs to the glycerate kinase type-1 family. (378 aa)    
Predicted Functional Partners:
hprA
2-hydroxyacid dehydrogenase; Pfam matches to PF02826.15 2-Hacid_dh_C, and to PF00389.26 2-Hacid_dh; draft locus tag CAMGR0001_0238; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.930
pgm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.907
aldB
Aldehyde dehydrogenase B; Pfam match to PF00171.18 Aldedh; draft locus tag CAMGR0001_2585; Belongs to the aldehyde dehydrogenase family.
   
 
 0.903
AKT93104.1
GntP family permease, putative gluconate transporter; Pfam match to PF02447.12 GntP_permease; draft locus tag CAMGR0001_2817.
  
  
 0.657
AKT93106.1
Hypothetical protein; Draft locus tag CAMGR0001_2819.
       0.590
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.