STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93221.1Putative protein (DUF711 domain); Pfam match to PF05167.8 DUF711; draft locus tag CAMGR0001_0547. (445 aa)    
Predicted Functional Partners:
AKT93222.1
ACT domain-containing protein; Pfam match to PF13740.2 ACT_6; draft locus tag CAMGR0001_0546; Belongs to the UPF0237 family.
 
     0.952
AKT93220.1
Hypothetical protein; Draft locus tag CAMGR0001_0548.
       0.697
trpS
tryptophanyl-tRNA synthetase; Pfam match to PF00579.21 tRNA-synt_1b; draft locus tag CAMGR0001_0544; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.619
AKT93223.1
Hypothetical membrane protein (DUF2628 domain); Pfam match to PF10947.4 DUF2628; draft locus tag CAMGR0001_0545.
       0.617
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.615
engA
GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.609
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.