STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgdD2-hydroxyglutaryl-CoA dehydratase, D-component; Pfam match to PF06050.9 HGD-D; draft locus tag CAMGR0001_0538. (369 aa)    
Predicted Functional Partners:
hgdC
Activator of 2-hydroxyglutaryl-CoA dehydratase; Pfam match to PF01869.16 BcrAD_BadFG; draft locus tag CAMGR0001_0539.
 
 0.987
yedF
Selenium metabolism protein; Pfam match to PF01206.13 TusA; draft locus tag CAMGR0001_1852; Belongs to the sulfur carrier protein TusA family.
 
    0.821
AKT93232.1
Ferredoxin-type protein, NapH family; Pfam matches to PF12801.3 Fer4_5, and to PF12801.3 Fer4_5; draft locus tag CAMGR0001_0536.
 
    0.676
AKT93231.1
Molybdenum ABC transporter, ModA-like periplasmic molybdate-binding protein; Pfam match to PF13531.2 SBP_bac_11; draft locus tag CAMGR0001_0537.
 
     0.634
AKT91945.1
Putative selenium metabolism protein, YedE family; Pfam match to PF04143.10 Sulf_transp; draft locus tag CAMGR0001_1895.
 
    0.624
AKT93131.1
Activator of 2-hydroxyglutaryl-CoA dehydratase / 2-hydroxyglutaryl-CoA dehydratase fusion protein; Pfam matches to PF09989.5 DUF2229, and to PF01869.16 BcrAD_BadFG, and to PF01869.16 BcrAD_BadFG, and to PF06050.9 HGD-D; draft locus tag CAMGR0001_2857.
  
 
 0.615
AKT93233.1
Putative iron-molybdenum cofactor synthase; Pfam match to PF04055.17 Radical_SAM; draft locus tag CAMGR0001_0535.
       0.566
AKT93227.1
Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.16 EamA; draft locus tag CAMGR0001_0541.
       0.475
AKT93228.1
Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.16 EamA; draft locus tag CAMGR0001_0540.
       0.475
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.