STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93262.1Long-chain fatty acid ABC transporter, fused permease and ATPase components, SbmA family; Pfam match to PF05992.8 SbmA_BacA; draft locus tag CAMGR0001_0500. (322 aa)    
Predicted Functional Partners:
AKT93261.1
Zinc-dependent peptidase, M16 family; Pfam matches to PF00675.16 Peptidase_M16, and to PF05193.17 Peptidase_M16_C, and to PF05193.17 Peptidase_M16_C; draft locus tag CAMGR0001_0501.
       0.773
AKT93260.1
Hypothetical protein; Draft locus tag CAMGR0001_0502.
       0.554
fdhC
Formate dehydrogenase N, cytochrome b-556 subunit; Pfam match to PF01292.16 Ni_hydr_CYTB; draft locus tag CAMGR0001_1853.
  
     0.402
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.