STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93275.1Putative lipoprotein, putative beta-barrel assembly machinery complex lipoprotein BamB; Draft locus tag CAMGR0001_0485. (337 aa)    
Predicted Functional Partners:
AKT93274.1
Hypothetical protein; Possible beta-barrel assembly machinery complex protein BamC; draft locus tag CAMGR0001_0486.
       0.800
AKT93276.1
Hypothetical protein; Possible beta-barrel assembly machinery complex protein BamE; draft locus tag CAMGR0001_0484.
       0.800
coaX
Pantothenate kinase, type III; Pfam match to PF03309.10 Pan_kinase; draft locus tag CAMGR0001_0483.
       0.800
hisG(S)
ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
       0.800
gatC
Glu-tRNA(Gln) amidotransferase, subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.593
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.590
lysS
lysyl-tRNA synthetase; Pfam matches to PF00152.16 tRNA-synt_2, and to PF01336.21 tRNA_anti-codon; draft locus tag CAMGR0001_0491; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.590
fur
Ferric uptake regulation protein; Pfam match to PF01475.15 FUR; draft locus tag CAMGR0001_0490; Belongs to the Fur family.
       0.590
cvpA
Putative membrane protein, CvpA family; Pfam match to PF02674.12 Colicin_V; draft locus tag CAMGR0001_0489.
       0.590
pilT
Type II/IV secretion system protein, PilT/PilU family; Pfam match to PF00437.16 T2SSE; draft locus tag CAMGR0001_0488.
       0.590
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (18%) [HD]
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