STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93294.1Putative protein (DUF234 domain); Pfam match to PF03008.10 DUF234; draft locus tag CAMGR0001_0453. (278 aa)    
Predicted Functional Partners:
csdA
Cysteine sulfinate desulfinase; Pfam match to PF00266.15 Aminotran_5; draft locus tag CAMGR0001_0455.
       0.567
AKT92378.1
Putative membrane protein; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1228.
  
     0.564
AKT91601.1
Tetratricopeptide repeat protein; Pfam match to PF13432.2 TPR_16; draft locus tag CAMGR0001_0038.
  
     0.555
mreC
Rod shape-determining protein MreC; Pfam match to PF04085.10 MreC; draft locus tag CAMGR0001_2715.
  
     0.503
dut
dUTPase, dimeric; Pfam match to PF08761.7 dUTPase_2; draft locus tag CAMGR0001_2476.
  
     0.470
trxC
Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189.
  
     0.468
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
     0.454
AKT92349.1
DHH-type phosphohydrolase; Draft locus tag CAMGR0001_1268.
  
     0.436
AKT92475.1
Putative type II secretion system protein; Draft locus tag CAMGR0001_1103.
  
     0.413
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.