STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93314.1Hypothetical protein; Draft locus tag CAMGR0001_0423. (205 aa)    
Predicted Functional Partners:
AKT93313.1
Hypothetical protein; Draft locus tag CAMGR0001_0424.
       0.773
AKT93312.1
Transporter, LysE family; Pfam match to PF01810.14 LysE; draft locus tag CAMGR0001_0425.
       0.768
AKT93310.1
Hypothetical protein; Draft locus tag CAMGR0001_0427.
       0.644
AKT93311.1
Hypothetical protein; Draft locus tag CAMGR0001_0426.
       0.644
AKT93317.1
Putative formate dehydrogenase-associated protein; Draft locus tag CAMGR0001_0418.
       0.430
fdhG
Formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.426
fdhF
Formate dehydrogenase N, alpha subunit, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding; draft locus tags CAMGR0001_0419 and CAMGR0001_0420; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.426
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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