STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93322.1Putative thioredoxin-like protein, DsbA family; Pfam match to PF13098.2 Thioredoxin_2; draft locus tag CAMGR0001_0411. (237 aa)    
Predicted Functional Partners:
dsbD
Thiol:disulfide interchange protein DsbD; Pfam matches to PF11412.4 DsbC, and to PF02683.11 DsbD, and to PF00085.16 Thioredoxin; draft locus tag CAMGR0001_2367.
  
 
 0.800
selA
Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.621
selB
Selenocysteine-specific elongation factor; Pfam matches to PF00009.23 GTP_EFTU, and to PF09107.7 SelB-wing_3; draft locus tag CAMGR0001_0412.
       0.621
polA
DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.483
AKT93319.1
Iron-sulfur cluster domain protein; Pfam match to PF12838.3 Fer4_7; draft locus tags CAMGR0001_0414 and CAMGR0001_0415.
       0.435
AKT93318.1
Putative formate dehydrogenase-specific chaperone; Draft locus tag CAMGR0001_0416.
       0.419
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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