STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93332.1Putative membrane protein; Draft locus tag CAMGR0001_0399. (86 aa)    
Predicted Functional Partners:
AKT93331.1
Putative membrane protein; Draft locus tag CAMGR0001_0400.
       0.773
AKT93333.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.13 DegT_DnrJ_EryC1; draft locus tag CAMGR0001_0398; Belongs to the DegT/DnrJ/EryC1 family.
       0.623
AKT93334.1
Pfam match to PF01370.17 Epimerase; draft locus tag CAMGR0001_0397.
       0.623
AKT93335.1
Aldolase/citrate lyase family protein; Pfam match to PF03328.10 HpcH_HpaI; draft locus tag CAMGR0001_0396; Belongs to the HpcH/HpaI aldolase family.
       0.623
AKT93336.1
HAD-superfamily hydrolase, subfamily IIA; Pfam matches to PF13344.2 Hydrolase_6, and to PF13242.2 Hydrolase_like; draft locus tag CAMGR0001_0395.
       0.623
AKT93337.1
Thiamine pyrophosphate binding domain protein; Pfam matches to PF02776.14 TPP_enzyme_N, and to PF00205.18 TPP_enzyme_M, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_0394.
       0.623
rfbG
CDP-glucose 4,6-dehydratase; Pfam match to PF16363.1 GDP_Man_Dehyd; draft locus tag CAMGR0001_0393.
       0.623
rfbF
Glucose-1-phosphate cytidylyltransferase; Pfam match to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_0392.
       0.623
AKT93326.1
Polysaccharide biosynthesis protein; Draft locus tag CAMGR0001_0406.
       0.462
AKT93327.1
Glycosyltransferase, family 2; Pfam match to PF00535.22 Glycos_transf_2; draft locus tag CAMGR0001_0405.
       0.462
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.