Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKT93334.1Pfam match to PF01370.17 Epimerase; draft locus tag CAMGR0001_0397. (309 aa)    
Predicted Functional Partners:
AKT93335.1
Aldolase/citrate lyase family protein; Pfam match to PF03328.10 HpcH_HpaI; draft locus tag CAMGR0001_0396; Belongs to the HpcH/HpaI aldolase family.
 
    0.886
rfbF
Glucose-1-phosphate cytidylyltransferase; Pfam match to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_0392.
  
 
 0.865
AKT93337.1
Thiamine pyrophosphate binding domain protein; Pfam matches to PF02776.14 TPP_enzyme_N, and to PF00205.18 TPP_enzyme_M, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_0394.
 
 
 0.863
AKT93333.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.13 DegT_DnrJ_EryC1; draft locus tag CAMGR0001_0398; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.850
rfbG
CDP-glucose 4,6-dehydratase; Pfam match to PF16363.1 GDP_Man_Dehyd; draft locus tag CAMGR0001_0393.
 
     0.841
AKT93336.1
HAD-superfamily hydrolase, subfamily IIA; Pfam matches to PF13344.2 Hydrolase_6, and to PF13242.2 Hydrolase_like; draft locus tag CAMGR0001_0395.
       0.773
aas
Bifunctional; Pfam matches to PF00501.24 AMP-binding, and to PF01553.17 Acyltransferase, and to PF07690.12 MFS_1; draft locus tag CAMGR0001_2165.
  
 
 0.719
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.717
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
  0.705
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
  0.675
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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