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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbFGlucose-1-phosphate cytidylyltransferase; Pfam match to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_0392. (257 aa)    
Predicted Functional Partners:
rfbG
CDP-glucose 4,6-dehydratase; Pfam match to PF16363.1 GDP_Man_Dehyd; draft locus tag CAMGR0001_0393.
 
 0.997
selB
Selenocysteine-specific elongation factor; Pfam matches to PF00009.23 GTP_EFTU, and to PF09107.7 SelB-wing_3; draft locus tag CAMGR0001_0412.
    
 0.993
AKT93062.1
Phosphomannomutase/phosphoglucomutase; Bifunctional; Pfam matches to PF02878.12 PGM_PMM_I, and to PF02879.12 PGM_PMM_II, and to PF02880.12 PGM_PMM_III, and to PF00408.16 PGM_PMM_IV; draft locus tag CAMGR0001_1842.
  
 
 0.935
galU
UTP--glucose-1-phosphate uridylyltransferase; Pfam match to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1722.
    
 0.929
AKT93333.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.13 DegT_DnrJ_EryC1; draft locus tag CAMGR0001_0398; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.900
AKT93334.1
Pfam match to PF01370.17 Epimerase; draft locus tag CAMGR0001_0397.
  
 
 0.881
AKT93335.1
Aldolase/citrate lyase family protein; Pfam match to PF03328.10 HpcH_HpaI; draft locus tag CAMGR0001_0396; Belongs to the HpcH/HpaI aldolase family.
  
    0.801
AKT93337.1
Thiamine pyrophosphate binding domain protein; Pfam matches to PF02776.14 TPP_enzyme_N, and to PF00205.18 TPP_enzyme_M, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_0394.
  
   0.799
AKT93336.1
HAD-superfamily hydrolase, subfamily IIA; Pfam matches to PF13344.2 Hydrolase_6, and to PF13242.2 Hydrolase_like; draft locus tag CAMGR0001_0395.
  
    0.784
AKT92200.1
Bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Pfam matches to PF01050.14 MannoseP_isomer, and to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1498; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.660
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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