STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porPyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171. (1193 aa)    
Predicted Functional Partners:
oorA
2-oxoglutarate:acceptor oxidoreductase, alpha subunit; Pfam match to PF01855.15 POR_N; draft locus tag CAMGR0001_0940.
  
 0.999
oorB
2-oxoglutarate:acceptor oxidoreductase, beta subunit; Pfam match to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_0939.
  
 0.999
oorC
2-oxoglutarate:acceptor oxidoreductase, gamma subunit; Pfam match to PF01558.14 POR; draft locus tag CAMGR0001_0938.
  
 
 0.996
nosG
Menaquinol dehydrogenase NosGH, periplasmic component NosG; Pfam matches to PF12838.3 Fer4_7, and to PF00037.23 Fer4; draft locus tag CAMGR0001_2190.
  
 
 0.995
hyfG
Hydrogenase-4, component G; Pfam matches to PF00346.15 Complex1_49kDa, and to PF00329.15 Complex1_30kDa, and to PF00374.15 NiFeSe_Hases, and to PF00346.15 Complex1_49kDa; draft locus tag CAMGR0001_1282.
  
 
 0.987
frdC
Fumarate reductase, cytochrome b subunit; Pfam match to PF01127.18 Sdh_cyt; draft locus tag CAMGR0001_1422.
   
  
 0.980
nuoI
NADH:quinone oxidoreductase I, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.977
hyfH
Hydrogenase-4, component H; Pfam match to PF12838.3 Fer4_7; draft locus tag CAMGR0001_1283.
  
 
 0.977
AKT93246.1
Ferredoxin; Draft locus tag CAMGR0001_0518.
  
 
 0.977
nuoB
NADH:quinone oxidoreductase I, chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.974
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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