STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcuBAnaerobic C4-dicarboxylate transporter; Pfam matches to PF03605.10 DcuA_DcuB, and to PF03605.10 DcuA_DcuB; draft locus tag CAMGR0001_2185. (555 aa)    
Predicted Functional Partners:
AKT93455.1
Putative C4-dicarboxylate transporter, DcuC family; Pfam match to PF03606.11 DcuC; draft locus tag CAMGR0001_2270.
  
   
 0.735
dcuC
Putative C4-dicarboxylate transporter, DcuC family; Pfam match to PF03606.11 DcuC; draft locus tag CAMGR0001_2271.
  
   
 0.713
AKT91587.1
Putative C4-dicarboxylate transporter, DcuC family; Pfam match to PF03606.11 DcuC; draft locus tag CAMGR0001_0058.
  
   
 0.701
AKT92442.1
Bacterial OB fold (BOF) protein; Pfam match to PF04076.9 BOF; draft locus tag CAMGR0001_1140.
  
     0.599
AKT93391.1
NCAIR mutase (PurE)-related protein; Pfam match to PF00731.16 AIRC; draft locus tag CAMGR0001_2181.
       0.480
AKT93392.1
ATP-utilizing enzyme (PP-loop superfamily); Pfam match to PF01171.16 ATP_bind_3; draft locus tag CAMGR0001_2182.
       0.470
AKT93393.1
Putative protein (DUF111 domain); Pfam match to PF01969.13 DUF111; draft locus tag CAMGR0001_2183; Belongs to the LarC family.
       0.470
AKT93394.1
Putative protein (DUF2088 domain); Pfam match to PF09861.5 DUF2088; draft locus tag CAMGR0001_2184.
       0.470
AKT92384.1
YbaK-like protein YeaK; Pfam match to PF04073.11 tRNA_edit; draft locus tag CAMGR0001_1221.
  
     0.445
ttdB
L-tartrate dehydratase, subunit beta; Pfam match to PF05683.8 Fumerase_C; draft locus tag CAMGR0001_2178.
  
  
 0.443
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.