STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosDCopper ABC transporter NosDFY, periplasmic copper-binding protein NosD; Pfam matches to PF05048.9 NosD, and to PF05048.9 NosD; draft locus tag CAMGR0001_2189. (401 aa)    
Predicted Functional Partners:
nosY
Copper ABC transporter NosDFY, putative permease protein NosY; Pfam match to PF12679.3 ABC2_membrane_2; draft locus tag CAMGR0001_2199.
 
 
 0.980
AKT93405.1
Hypothetical protein; Draft locus tag CAMGR0001_2195.
 
 
 0.979
nosZ
Nitrous oxide reductase; Pfam matches to PF13473.2 Cupredoxin_1, and to PF00034.17 Cytochrom_C; draft locus tag CAMGR0001_2187.
 
  
 0.977
AKT93398.1
Putative membrane protein; Draft locus tag CAMGR0001_2188.
 
 
 0.973
nosF
Copper ABC transporter NosDFY, putative ATP-binding protein NosF; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2194.
 
 
 0.953
nosH
Menaquinol dehydrogenase NosGH, membrane component NosH; Pfam matches to PF12801.3 Fer4_5, and to PF13187.2 Fer4_9, and to PF12801.3 Fer4_5; draft locus tag CAMGR0001_2193.
 
  
 0.947
nosC2
Monoheme c-type cytochrome; Draft locus tag CAMGR0001_2192.
 
     0.937
nosG
Menaquinol dehydrogenase NosGH, periplasmic component NosG; Pfam matches to PF12838.3 Fer4_7, and to PF00037.23 Fer4; draft locus tag CAMGR0001_2190.
 
     0.921
AKT93423.1
NosL family protein; Pfam matches to PF05573.8 NosL, and to PF05573.8 NosL; draft locus tag CAMGR0001_2225.
 
 
 0.873
nosC1
Monoheme c-type cytochrome; Draft locus tag CAMGR0001_2191.
       0.800
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.