STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93414.1Alpha/beta hydrolase family protein; Pfam match to PF06821.9 Ser_hydrolase; draft locus tag CAMGR0001_2214. (190 aa)    
Predicted Functional Partners:
AKT93415.1
Putative protein (DUF364, DUF4213 domains); Pfam matches to PF04016.8 DUF364, and to PF13938.2 DUF4213; draft locus tag CAMGR0001_2215.
       0.596
AKT93416.1
Putative autotransporter serine protease; Pfam matches to PF00082.18 Peptidase_S8, and to PF03797.15 Autotransporter, and to PF12951.3 Autotrns_rpt; draft locus tag CAMGR0001_2217.
 
     0.517
AKT93567.1
Hypothetical protein; Pfam match to PF03083.12 MtN3_slv; draft locus tag CAMGR0001_0256.
  
     0.402
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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