Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKT93423.1NosL family protein; Pfam matches to PF05573.8 NosL, and to PF05573.8 NosL; draft locus tag CAMGR0001_2225. (373 aa)    
Predicted Functional Partners:
AKT93419.1
Putative membrane protein; Draft locus tag CAMGR0001_2221.
 
     0.956
AKT93421.1
ABC transporter, permease protein; Pfam match to PF02687.17 FtsX; draft locus tag CAMGR0001_2223.
 
     0.955
AKT93420.1
ABC transporter, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2222.
 
     0.847
AKT93418.1
Hypothetical protein; Draft locus tag CAMGR0001_2220.
       0.812
AKT93422.1
Hypothetical protein; Draft locus tag CAMGR0001_2224.
       0.810
nosY
Copper ABC transporter NosDFY, putative permease protein NosY; Pfam match to PF12679.3 ABC2_membrane_2; draft locus tag CAMGR0001_2199.
 
  
 0.802
nosL
Nitrous oxide reductase accessory protein; Pfam match to PF05573.8 NosL; draft locus tag CAMGR0001_2200.
  
     0.771
AKT93426.1
Cytochrome c nitrite reductase, NrfD subunit; Pfam match to PF03916.10 NrfD; draft locus tag CAMGR0001_2228.
 
    0.757
nosD
Copper ABC transporter NosDFY, periplasmic copper-binding protein NosD; Pfam matches to PF05048.9 NosD, and to PF05048.9 NosD; draft locus tag CAMGR0001_2189.
 
  
 0.751
AKT93429.1
Cytochrome c family protein; Respiratory sulfite reductase that catalyzes the reduction of sulfite to sulfide in a single step, consuming six electrons in the process; Belongs to the multiheme cytochrome c family.
 
    0.746
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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