STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93427.1Cytochrome c nitrite reductase, NrfC subunit; Pfam match to PF13247.2 Fer4_11; draft locus tag CAMGR0001_2229. (235 aa)    
Predicted Functional Partners:
AKT93426.1
Cytochrome c nitrite reductase, NrfD subunit; Pfam match to PF03916.10 NrfD; draft locus tag CAMGR0001_2228.
 
  
 0.882
AKT92822.1
Putative restriction endonuclease; Pfam match to PF04471.8 Mrr_cat; draft locus tag CAMGR0001_2448.
   
    0.877
AKT93425.1
Cytochrome c biogenesis protein; Pfam matches to PF01578.16 Cytochrom_C_asm, and to PF05140.10 ResB, and to PF05140.10 ResB; draft locus tag CAMGR0001_2227.
  
  
 0.757
AKT93424.1
Sel1 domain repeat-containing protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.
       0.736
AKT93428.1
FKBP-type peptidyl-prolyl cis-trans isomerase; Pfam matches to PF01346.14 FKBP_N, and to PF00254.24 FKBP_C; draft locus tag CAMGR0001_2230.
       0.686
AKT92016.1
Putative thiosulfate/polysulfide reductase, molybdenum-binding subunit; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding, and to PF04879.12 Molybdop_Fe4S4; draft locus tag CAMGR0001_1712; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.677
fdhC
Formate dehydrogenase N, cytochrome b-556 subunit; Pfam match to PF01292.16 Ni_hydr_CYTB; draft locus tag CAMGR0001_1853.
  
 
 0.674
napA
Periplasmic nitrate reductase NapAB, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.653
fdhF
Formate dehydrogenase N, alpha subunit, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding; draft locus tags CAMGR0001_0419 and CAMGR0001_0420; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.653
AKT93420.1
ABC transporter, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2222.
  
    0.645
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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