STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93472.1Two-component system response regulator; Pfam match to PF00072.20 Response_reg; draft locus tag CAMGR0001_2304. (230 aa)    
Predicted Functional Partners:
AKT93471.1
Cache sensor-containing two-component system histidine kinase; Pfam matches to PF02518.22 HATPase_c, and to PF02743.14 Cache_1; draft locus tag CAMGR0001_2303.
   
 
 0.809
AKT91922.1
Two-component system sensor histidine kinase; Pfam matches to PF02518.22 HATPase_c, and to PF00072.20 Response_reg, and to PF00512.21 HisKA, and to PF08376.6 NIT; draft locus tag CAMGR0001_2504.
 
 
 0.801
AKT92020.1
Two-component system sensor histidine kinase; Pfam match to PF02518.22 HATPase_c; draft locus tag CAMGR0001_1716.
  
   0.774
AKT91874.1
Two-component system sensor histidine kinase; Pfam matches to PF02518.22 HATPase_c, and to PF00512.21 HisKA; draft locus tag CAMGR0001_2568.
  
   0.756
AKT93538.1
Putative PAS sensor-containing diguanylate phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00989.20 PAS; draft locus tag CAMGR0001_0214.
  
 
 0.751
AKT92622.1
Two-component system sensor histidine kinase; Pfam matches to PF02518.22 HATPase_c, and to PF00672.21 HAMP, and to PF00512.21 HisKA; draft locus tag CAMGR0001_0873.
  
 
 0.722
AKT91923.1
Two-component system response regulator; Pfam match to PF00072.20 Response_reg; draft locus tag CAMGR0001_2503.
  
 
 0.717
AKT92019.1
Two-component system response regulator; Pfam matches to PF00072.20 Response_reg, and to PF00486.24 Trans_reg_C; draft locus tag CAMGR0001_1715.
  
     0.708
AKT91875.1
Two-component system response regulator; Pfam matches to PF00072.20 Response_reg, and to PF00486.24 Trans_reg_C; draft locus tag CAMGR0001_2567.
  
     0.702
cprR
Two-component system response regulator; Pfam matches to PF00072.20 Response_reg, and to PF00486.24 Trans_reg_C; draft locus tag CAMGR0001_0755.
  
     0.698
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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